IMAGE ANALYSE

SPITFIR(e)

Denoising and deconvolution algorithm for 2D-3D-3D+t microscopy images. This deconvolution method is flexible and have been tested on WideField, Confocal, Lattice Light Sheet, MultiFocus, STED microscopy

Image preprocessing and Data management.

BioImageIT: open-source integrator for Image DATA management and analysis.

About: Ongoing project of the Serpico-STED Team in the frame of the NRI (National Research Infrastructure – France BioImaging) and dissemination toward the 18 Imaging Facilities that constitute the Core of the Infrastructure.

Imaging and analysis of intracellular processes for 3D+time live cell imaging

NAVISCOPE: image-guided navigation and visualization of large data sets in live cell imaging and microscopy.

About: INRIA IPL project, initiated to implement novel machine-learning methods able to detect the main regions of interest, and automatic quantification of sparse sets of molecular interactions and cell processes during navigation to save memory and computational resources.

Classification of endocytic entry mechanisms.

About: Analysis of different modes of endocytosis: clathrin-mediated, and glyco(sphingo)lipid/lectin (termed GL-Lect)-mediated, using LLSM and single particle 3D tracking.